BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017E02SP1|AL427167
(779 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig943 1432 0.0
>3x_Contig943
Length = 2708
Score = 1432 bits (721), Expect = 0.0
Identities = 749/755 (99%), Gaps = 3/755 (0%)
Strand = Plus / Minus
Query: 21 ttacagaaaaggtttatggacgaacgaaagtattttgtgacataaaactacgctatttca 80
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2704 ttacagaaaaggtttatggacgaacgtaagtattttgtgacataaaactacgctatttca 2645
Query: 81 aatcaactagagctttttcgaatccgtttagagtcatagtttccaatcgattccagagtt 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2644 aatcaactagagctttttcgaatccgtttagagtcatagtttccaatcgattccagagtt 2585
Query: 141 cgaatttttcaaaaattatcaaagtcgtcaaacgtgatatgtcttgctgtcacatgatat 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2584 cgaatttttcaaaaattatcaaagtcgtcaaacgtgatatgtcttgctgtcacatgatat 2525
Query: 201 caaaattatcttaaagtcaaatccgtcactctgtcctgccgcagcggatgacgatggatt 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2524 caaaattatcttaaagtcaaatccgtcactctgtcctgccgcagcggatgacgatggatt 2465
Query: 261 ctgtgaaataaagaatctacaaatgtgccaacatctcacctctcgccaaatcgacgctgc 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2464 ctgtgaaataaagaatctacaaatgtgccaacatctcacctctcgccaaatcgacgctgc 2405
Query: 321 gatgagtgaagcttgaacgtggttgaaatctttaataaatgatgataatttatgatattt 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2404 gatgagtgaagcttgaacgtggttgaaatctttaataaatgatgataatttatgatattt 2345
Query: 381 agtaacctttgtatatgtatgtataaaccatggtgtacaaggacttttgtacacgaattg 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2344 agtaacctttgtatatgtatgtataaaccatggtgtacaaggacttttgtacacgaattg 2285
Query: 441 tagagagtactagatcgcatgagtgattcaattaataattaattagatcccatcaattga 500
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2284 tagagagtactagatcgcatgagtgatttaattaataattaattagatcccatcaattga 2225
Query: 501 agcctttatcagtctaccgaaatgaataaaaaaaaataagattggcaatgtatgatgaat 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2224 agcctttatcagtctaccgaaatgaataaaaaaaaataagattggcaatgtatgatgaat 2165
Query: 561 gagaaaagacgttaatcgttaattgtgaggtatgggatgagagaataatcaatctcgtca 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2164 gagaaaagacgttaatcgttaattgtgaggtatgggatgagagaataatcaatctcgtca 2105
Query: 621 cgtttaatcaacttcttcgacagtwggaccggaatcaccgccacctggagcagcaccacc 680
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2104 cgtttaatcaacttcttcgacagtaggaccggaatcaccgccacctggagcagcaccacc 2045
Query: 681 gcctggagcacctgggaagccacctgggggcaccaccttggagcaccgccagctgggggt 740
||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||
Sbjct: 2044 gcctggagcacctgggaagccacct-ggggcaccacc-tggagcaccgccagct-ggggt 1988
Query: 741 accgccagcgctgtagaacttggtcatgattgggt 775
|||||||||||||||||||||||||||||||||||
Sbjct: 1987 accgccagcgctgtagaacttggtcatgattgggt 1953
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6778
Number of Sequences: 1807
Number of extensions: 6778
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 779
length of database: 10,358,551
effective HSP length: 16
effective length of query: 763
effective length of database: 10,329,639
effective search space: 7881514557
effective search space used: 7881514557
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)